miRBase entry: cfa-mir-8887

Stem-loop cfa-mir-8887


Accession
MI0027989
Description
Canis familiaris cfa-mir-8887 precursor miRNA


Sequence

cuuggaagcucuuggaccagagggugcuugUCCUGCCAUGGCAUUCCGGAGgacugagggcauguccaugauccaggcacuggccaugacgguggccgagaucccuguguuccugua
.............(((.((.((((..(((((((((.((((((...(((((((((((....)).))))....))).)).....)))))).))).)).))))..)))).)).)))....

Structure
cuuggaagcucuu   c  g    ug    -  -   C      --AUU  -   ----    -  a 
             gga ca aggg  cuug UC CUG CAUGGC     CC GGA    Ggac ug g
             ||| || ||||  |||| || ||| ||||||     || |||    |||| ||  
             ccu gu uccc  gagc gg ggc guaccg     gg ccu    ccug ac g
---------augu   u  g    ua    c  u   a      gucac  a   agua    u  g 


Annotation confidence Not enough data
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Genome context
chr9: 54627793-54627909 [-]

Database links

Mature cfa-miR-8887

Accession MIMAT0034391
Description Canis familiaris cfa-miR-8887 mature miRNA
Sequence 31 - UCCUGCCAUGGCAUUCCGGAG - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545