miRBase entry: cfa-mir-8879

Stem-loop cfa-mir-8879


Accession
MI0027975
Description
Canis familiaris cfa-mir-8879 precursor miRNA


Sequence

gacuugaucccaggaccccgggagcacgaccugagccaaaggcagacccaaccacugaggcacccaggcaucccuagcUACUCAUUCCUCUGUCUUGGGCUugugccuccccacaugcagcauccuggccccaccaaggua
..((((...((((((....((((((((.....(((((.((((((((.........((((....(.(((....))).)...))))....)))))))).)))))))).)))))...........))))))......))))...

Structure
-ga    ---auc      -------cccc     -   gaccu     a        cccaaccac    gcac c   c 
   cuug      ccagga           gggag cac     gagcc aaggcaga         ugag    c agg a
   ||||      ||||||           ||||| |||     ||||| ||||||||         ||||    | |||  
   gaac      gguccu           cccuc gug     uUCGG UUCUGUCU         ACUC    g ucc u
aug    cacccc      acgacguacac     c   -----     G        -----CCUU    -AUc a   c 


Annotation confidence Not enough data
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Genome context
chr6: 15817410-15817550 [+]

Database links

Mature cfa-miR-8879

Accession MIMAT0034379
Description Canis familiaris cfa-miR-8879 mature miRNA
Sequence 79 - UACUCAUUCCUCUGUCUUGGGCU - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545