miRBase entry: cfa-mir-8878

Stem-loop cfa-mir-8878


Accession
MI0027974
Description
Canis familiaris cfa-mir-8878 precursor miRNA


Sequence

uuggguccccagggacuuagagucuUCGUGACGGUGACCAGACCUUGCAGaaccgcuccgaggcccugagguggccugucaucagccuggacuugucuuccucucuguggggaug
....(((((((((((....((((((..((((((((.(((((.(((((.((.....)).)))))..))..))).))).)))))......))))))....)))).....))))))).

Structure
uugg       -----    cuua      ----UC     -   G   --  -A     C  a 
    gucccca     ggga    gagucu      GUGAC GGU ACC  AG  CCUUG AG a
    |||||||     ||||    ||||||      ||||| ||| |||  ||  ||||| || c
    uaggggu     uccu    uucagg      uacug ccg ugg  uc  ggagc uc c
---g       gucuc    ucug      uccgac     u   g   ag  cc     c  g 


Annotation confidence Not enough data
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Genome context
chr6: 21119782-21119896 [+]

Database links

Mature cfa-miR-8878

Accession MIMAT0034378
Description Canis familiaris cfa-miR-8878 mature miRNA
Sequence 26 - UCGUGACGGUGACCAGACCUUGCAG - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545