miRBase entry: cfa-mir-8875

Stem-loop cfa-mir-8875


Accession
MI0027971
Description
Canis familiaris cfa-mir-8875 precursor miRNA


Sequence

aaaaaaaaaaaaaaaggccccaggccuugcgcucccggccUGCUGUAGCGGAACCCGGGGCGGGCguugccuagaaacgcaucauugucuuuggguucuuagccuugcgcaggcagcaguucugggacacuuggcgggguagucc
................(((((..(((..(.(.((((((.(((((((.(((((((((((((((((((((.......)))))....))))).)))))))).........)))..)))))))..))))))).)..)))))))).....

Structure
aaaaaaaaaaaaaaag     ag   uu c c      -c       -A   ---------        -     ----     gc 
                gcccc  gcc  g g ucccgg  cUGCUGU  GCG         GAACCCGG GGCGG    GCguu  c
                |||||  |||  | | ||||||  |||||||  |||         |||||||| |||||    |||||  u
                ugggg  cgg  c c aggguc  gacgacg  cgc         cuuggguu cuguu    cgcaa  a
-----------ccuga     --   uu a -      uu       ga   guuccgauu        u     acua     ag 


Annotation confidence Not enough data
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Genome context
chr6: 21081056-21081200 [-]

Database links

Mature cfa-miR-8875

Accession MIMAT0034375
Description Canis familiaris cfa-miR-8875 mature miRNA
Sequence 41 - UGCUGUAGCGGAACCCGGGGCGGGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545