miRBase entry: cfa-mir-8870

Stem-loop cfa-mir-8870


Accession
MI0027963
Description
Canis familiaris cfa-mir-8870 precursor miRNA


Sequence

cugacugucauggaugcgauucgaagcuguggguuccuggcgucgagcgugggcuggucccgccucuggaccUGCCUCUGCAACCCCAUGGUCCccacuuugcagccagacggcaagagccucagauca
((((..(((.(((.(((((.........(((((..(((((.((...(((.((((.(((((.......))))).)))).))).)).))).))..))))).))))).))))))(((....)))))))....

Structure
----    --------cu   a   a     uucgaagcu     uu  -   c  cga   u    u     cg 
    cuga          guc ugg ugcga         guggg  cc ugg gu   gcg gggc ggucc  c
    ||||          ||| ||| |||||         |||||  || ||| ||   ||| |||| |||||  c
    gacu          cag acc acguu         caccC  GG ACC CA   CGU UCCG ccagg  u
acua    ccgagaacgg   -   g     --------u     CU  U   C  --A   C    U     uc 


Annotation confidence Not enough data
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Genome context
chr5: 31002729-31002857 [-]

Database links

Mature cfa-miR-8870

Accession MIMAT0034367
Description Canis familiaris cfa-miR-8870 mature miRNA
Sequence 73 - UGCCUCUGCAACCCCAUGGUCC - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545