miRBase entry: cfa-mir-8858

Stem-loop cfa-mir-8858


Accession
MI0027949
Description
Canis familiaris cfa-mir-8858 precursor miRNA


Sequence

aggguuauugaaaucgcggugugagcugucuuccgucuauaaauaugccucucccggguucugcugcaggcuuucagGCAGCGAGCGCAGAGACGGCUGgugagggaggagggacugcuuaaggcgacagcagauaagu
..(.(((((....((((....(((((.(((((((.(((....((..(((((((..(.((((.(((((..(....)..))))))))).).)))).)))..))...)))))).)))).)))))..)))).....))))).)

Structure
ag g     -gaaa    ggug     u    -   g   auaa  au   -    cc g    u     ag c 
  g uuauu     ucgc    ugagc gucu ucc ucu    au  gcc ucuc  g guuc gcugc  g u
  | |||||     ||||    ||||| |||| ||| |||    ||  ||| ||||  | |||| |||||  |  
  u aauag     agcg    auucg cagg agg agg    ug  CGG AGAG  C CGAG CGACG  c u
-- g     acgac    --ga     u    g   -   -gag  GU   C    -A G    -     ga u 


Annotation confidence Not enough data
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Genome context
chr18: 51707336-51707474 [-]

Database links

Mature cfa-miR-8858

Accession MIMAT0034353
Description Canis familiaris cfa-miR-8858 mature miRNA
Sequence 78 - GCAGCGAGCGCAGAGACGGCUG - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545