miRBase entry: cfa-mir-8857

Stem-loop cfa-mir-8857


Accession
MI0027948
Description
Canis familiaris cfa-mir-8857 precursor miRNA


Sequence

gacucugauagggaaggaauagagcccuuugaucugggcuuaguacaucuaaauggcuagaaguuaagucccuUAGCUUCUCCUUAUGUUUUGGGCcagaauaaguugcucucuuucccuuguuagagaag
..((((((((((((((((...((((..((((.(((((.(((((.((((......((..((((((((((...))))))))))))..)))).)))))))))).))))..)))))))))))).))))))))...

Structure
-ga        -        aua    cc    a     g     u    cuaaau  cu          u 
   cucugaua gggaagga   gagc  uuug ucugg cuuag acau      gg  agaaguuaag  
   |||||||| ||||||||   ||||  |||| ||||| ||||| ||||      ||  |||||||||| c
   gagauugu cccuuucu   cucg  gaau agacC GGGUU UGUA      CC  UCUUCGAUuc  
gaa        u        ---    uu    a     -     U    ----UU  --          c 


Annotation confidence Not enough data
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Genome context
chr19: 13642448-13642578 [+]

Database links

Mature cfa-miR-8857

Accession MIMAT0034352
Description Canis familiaris cfa-miR-8857 mature miRNA
Sequence 74 - UAGCUUCUCCUUAUGUUUUGGGC - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545