Stem-loop cfa-mir-8853

Accession

MI0027944

Description

Canis familiaris cfa-mir-8853 precursor miRNA

Sequence

acccgggcggggggcguuggggaagccgcggccuggaccgggacccacagcggcggcuccaccuggggcagggcUCUGACCCGCACUCGGCCUGCGGUaagcagcgccccacugcgcgaugggggcugagggc
.((((.(((((((((((((.....(((((((((.((..((((...((.(((....(((((....)))))...))).)).))))..)).)))).)))))...))))))))).)))).)...)))..........

Structure

---------a   --- g    -         gggaa     -    u  ac    acc  c   ggcg     a 
          ccc   g gcgg ggggcguug     gccgc ggcc gg  cggg   ca agc    gcucc c
          |||   | |||| |||||||||     ||||| |||| ||  ||||   || |||    |||||  
          ggg   c cguc ccccgcgac     UGGCG CCGG UC  GCCC   GU Ucg    cgggg c
cgggagucgg   uag g    a         --gaa     U    C  AC    --A  C   -gga     u 

Annotation confidence Not enough data

Genome context

chr16: 1275336-1275468 [+]

Mature cfa-miR-8853

• Accession: MIMAT0034348
• Description: Canis familiaris cfa-miR-8853 mature miRNA
• Sequence: 75 - UCUGACCCGCACUCGGCCUGCGGU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545