miRBase entry: cfa-mir-8832

Stem-loop cfa-mir-8832


Accession
MI0027918
Description
Canis familiaris cfa-mir-8832 precursor miRNA


Sequence

gcccauuguuacacauccucaggcagguggccccgggccaUCCAGGGGUAGGAUUGAUUGUGGGAcacccaugcauccucaccacaacucagacuuucuccccauuauguccccagguucuucccaagguggcacaaugguggcc
(((((((((..((...(((..((.(((.((((..(((.(((...((((.((((((((((((((..................)))))).))))...))))))))...))).)))..)))))))))..)))))..))))))..))).

Structure
-   --      ua  cau   ca  c   u    cc   c   CCA    U    ---    -      GAcaccca 
 gcc  cauugu  ca   ccu  gg agg ggcc  ggg caU   GGGG AGGA   UUGA UUGUGG        u
 |||  ||||||  ||   |||  || ||| ||||  ||| |||   |||| ||||   |||| ||||||         
 cgg  guaaca  gu   gga  cc uuc uugg  ccc gua   cccc ucuu   gacu aacacc        g
c   ug      cg  ---   ac  -   -    ac   u   uua    -    uca    c      acuccuac 


Annotation confidence Not enough data
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Genome context
chr12: 3200669-3200813 [-]

Database links

Mature cfa-miR-8832

Accession MIMAT0034325
Description Canis familiaris cfa-miR-8832 mature miRNA
Sequence 41 - UCCAGGGGUAGGAUUGAUUGUGGGA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545