miRBase entry: cfa-mir-8799c

Stem-loop cfa-mir-8799c


Accession
MI0027909
Description
Canis familiaris cfa-mir-8799c precursor miRNA
Gene family
MIPF0001881; mir-8799


Sequence

cccucccggccucugccugucccgggggaggccggauccggggcugugucccggcgcccugugcuccggagccugCGCUGUUGGAUUCGCGCUCCCGGACcgcgcagcccccuccgcggagccgccgcccgagcc
.....(((((((((.((......)).)))))))))....((((((((((.((((......((((((((((((....))).)))))...))))..))))...))))))))))(((.((((.....))))..)))..

Structure
cccucccggccucugccugucccgggggaggccggaucc          --c    cgcccu    ---     -   c 
                                       ggggcugugu   ccgg      gugc   uccgg agc u
                                       ||||||||||   ||||      ||||   ||||| |||  
                                       ccccgacgcg   GGCC      CGCG   AGGUU UCG g
---------------ccgagcccgccgccgaggcgccuc          cCA    ----CU    CUU     G   C 


Annotation confidence Not enough data
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Genome context
chr10: 37131530-37131664 [-]

Database links

Mature cfa-miR-8799c

Accession MIMAT0034318
Description Canis familiaris cfa-miR-8799c mature miRNA
Sequence 76 - CGCUGUUGGAUUCGCGCUCCCGGAC - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545