miRBase entry: cfa-mir-8825

Stem-loop cfa-mir-8825


Accession
MI0027906
Description
Canis familiaris cfa-mir-8825 precursor miRNA


Sequence

gaaacugugggggaaaguauggccagcaucagcugcugccUUGCUAAUGGAUAGCCAGAAAGGGCugugugggcucucaguucaggcuuggauucuggaggcuagggucagcaugcuuuccuuccucccuggcuggacuugaccu
.........(((..((((..((((((....(((((((((((((((...((((((((.(((((((((.....))))))...))).))))...))))....))).)))).))))).)))...........))))))..))))..)))

Structure
gaaacugug   ga    au      -------cauc   -     -    -   -AAU    ---    A   ---      g 
         ggg  aagu  ggccag           agc ugcug ccUU GCU    GGAU   AGCC GAA   AGGGCu u
         |||  ||||  ||||||           ||| ||||| |||| |||    ||||   |||| |||   |||||| g
         ucc  uuca  ucgguc           ucg acgac ggga cgg    cuua   ucgg cuu   ucucgg u
---------   ag    gg      ccuccuuccuu   u     u    u   aggu    ggu    a   gac      g 


Annotation confidence Not enough data
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Genome context
chr25: 9793701-9793845 [+]

Database links

Mature cfa-miR-8825

Accession MIMAT0034315
Description Canis familiaris cfa-miR-8825 mature miRNA
Sequence 41 - UUGCUAAUGGAUAGCCAGAAAGGGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545