miRBase entry: cfa-mir-8823

Stem-loop cfa-mir-8823


Accession
MI0027904
Description
Canis familiaris cfa-mir-8823 precursor miRNA


Sequence

ccugcucuccuccuccaaagaucccucaggugaucaauaaUUCCUUCCCGAGACUUUGCUUUAAUugcuaggaucagggggcaguuaggaugaguuagagguuggggaggagauuacagugugugggagauggggguggauggag
.((.(..(((.((((((....((((.((.((((((......((((((((((..((((((((((((((((..........))))))))....))).))))).))))))))))))))))..))...))))..)))))).))).).))

Structure
c  g uc   u      aaga    --u  -g      aauaaU          GA     -   ----        agga 
 cu c  ucc ccucca    uccc   ca  gugauc      UCCUUCCCGA  CUUUG CUU    UAAUugcu    u
 || |  ||| ||||||    ||||   ||  ||||||      ||||||||||  ||||| |||    ||||||||     
 ga g  agg gggggu    aggg   gu  cauuag      aggagggguu  gagau gag    auugacgg    c
-  g -u   u      --ag    ugu  ga      ------          -g     u   uagg        ggga 


Annotation confidence Not enough data
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Genome context
chr25: 45164925-45165069 [-]

Database links

Mature cfa-miR-8823

Accession MIMAT0034313
Description Canis familiaris cfa-miR-8823 mature miRNA
Sequence 41 - UUCCUUCCCGAGACUUUGCUUUAAU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545