miRBase entry: cfa-mir-8812

Stem-loop cfa-mir-8812


Accession
MI0027892
Description
Canis familiaris cfa-mir-8812 precursor miRNA


Sequence

ccccugcuuaacuggagccuuugagaguagcaucaUUUGAGUUCCAUCCCUAGGUCauucugauugaauugacuggagguggggcuuagguuuuggugcuuucuuacaugccccagaugauuguaac
....((((((.((((.((...((((((.((((((((((((((((((((((..((((((((.....))).))))))).)))))))))))))...)))))))))))))...)).)))).)))..)))..

Structure
cccc   --   a    a  cuu      u       ---             -  UA     -   u 
    ugc  uua cugg gc   ugagag agcauca   UUUGAGUUCCAUC CC  GGUCa uuc g
    |||  ||| |||| ||   |||||| |||||||   ||||||||||||| ||  ||||| ||| a
    aug  agu gacc cg   auucuu ucguggu   ggauucggggugg gg  ucagu aag u
--ca   uu   a    c  uac      -       uuu             a  --     u   u 


Annotation confidence Not enough data
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Genome context
chr21: 6284255-6284381 [-]

Database links

Mature cfa-miR-8812

Accession MIMAT0034302
Description Canis familiaris cfa-miR-8812 mature miRNA
Sequence 36 - UUUGAGUUCCAUCCCUAGGUC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545