miRBase entry: gra-MIR7504n

Stem-loop gra-MIR7504n


Accession
MI0027667
Description
Gossypium raimondii gra-MIR7504n precursor miRNA
Gene family
MIPF0001798; MIR7504


Sequence

caauaguuuuaugccauauuagcauuuucaucuugaauuucagcauuuucauccugaaaaaaauuaaauccaaauuaaaauccuuaaauucAGGAUAAAAUUACUGAUGUGGCAUaaaauuauua
.(((((((((((((((((((((.(((((.(((((((((((.((.(((((......((...........))......))))).)).))))))))))))))))..))))))))))))))))))))).

Structure
c                     -c     c           c  c     cauccu  aaaa 
 aauaguuuuaugccauauuag  auuuu aucuugaauuu ag auuuu      ga    a
 |||||||||||||||||||||  ||||| ||||||||||| || |||||      ||    a
 uuauuaaaaUACGGUGUAGUC  UAAAA UAGGAcuuaaa uc uaaaa      cu    u
a                     AU     -           u  c     uuaaac  aaau 


Annotation confidence Not enough data
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Genome context
chr8: 21259891-21260015 [-]

Database links

Mature gra-miR7504n

Accession MIMAT0034072
Description Gossypium raimondii gra-miR7504n mature miRNA
Sequence 92 - AGGAUAAAAUUACUGAUGUGGCAU - 115
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629