Stem-loop gra-MIR7504e

Accession

MI0027662

Description

Gossypium raimondii gra-MIR7504e precursor miRNA

Gene family

MIPF0001798; MIR7504

Sequence

uaauaggaaaaugacaaaucugauuuuuccucccgauuuuuaguauuucuaauugaauuugaaaaaauaggaaaaaguugaaaaucAGGAGAAAAAAAUCUGAUUUGUCAuucuucuauu
.(((((((.(((((((((((.(((((((.((((.(((((((((..(((((.(((...........))).)))))...))))))))).))))..))))))).))))))))))).)))))))

Structure

u       a           u       -c    c         -ua     a   gaau 
 aauagga aaugacaaauc gauuuuu  cucc gauuuuuag   uuucu auu    u
 ||||||| ||||||||||| |||||||  |||| |||||||||   ||||| |||    u
 uuaucuu uuACUGUUUAG CUAAAAA  GAGG cuaaaaguu   aaagg uaa    g
-       c           U       AA    A         gaa     a   aaaa 

Annotation confidence Not enough data

Genome context

chr2: 50912389-50912508 [+]

Mature gra-miR7504e

• Accession: MIMAT0034067
• Description: Gossypium raimondii gra-miR7504e mature miRNA
• Sequence: 87 - AGGAGAAAAAAAUCUGAUUUGUCA - 110
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629