Accession
MI0027523
Description
Amborella trichopoda
atr-MIR171b precursor miRNA
Gene family
MIPF0000030;
MIR171_1
Sequence
296
reads,
1337
reads per million, 4 experiments
gguaugaaguugguuuucaugggaggaaggcgaaggggacucgguucgcgugcgguguuggcacgguucaaucugacugcugcccugcuaguugugcaguaugguggugcgaUUGAGCCGUGCCAAUAUCACAcucaaucagccaucgaaucaagucuucuucuuccuccuccucuuccucuucuuauu
.(((.((((..((.......(((((((.((.((((((((((.((((((.(((.((((((((((((((((((((..(((((((..((((.......))))..)))))))..)))))))))))))))))))).)))............)))))).))))))))))..)))))))))...)).)))).))).
.(((.((((..((.......(((((((.((.((((((((((.((((((.(((.((((((((((((((((((((..(((((((..((((.......))))..)))))))..)))))))))))))))))))).)))............)))))).))))))))))..)))))))))...)).)))).))).
Structure
g u uu uuuucau a -c c -----------c c ug cc ua gua gaag gg gggagga gg gaaggggacu gguucg gug gguguuggcacgguucaauc acugcug cugc g ||| |||| || ||||||| || |||||||||| |||||| ||| |||||||||||||||||||| ||||||| |||| u uau cuuc cc uccuccu cc cuucuucuga cuaagc cAC CUAUAACCGUGCCGAGUUag ugguggu gacg u u u -u ----uuc - uu a uaccgacuaacu A cg au ug
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00060: 3430268-3430456 [+]
Database links
Mature atr-miR171b
| Accession | MIMAT0033925 |
| Description | Amborella trichopoda atr-miR171b mature miRNA |
| Sequence | 113 - UUGAGCCGUGCCAAUAUCACA - 133 |
| Evidence |
experimental
Illumina [1] |
References
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