miRBase entry: ath-MIR8182

Stem-loop ath-MIR8182


Accession
MI0026812
Description
Arabidopsis thaliana ath-MIR8182 precursor miRNA


Sequence

uuaucuucauacuuUUGUGUUGCGUUUCUGUUGAUUcuccuuuuauguauccucucggcucucucguuaaucuuuuauuacauaaacucgugcaucaacauaaacacaaaacagaagcaugaagauga
((((((((((.(((((((.(((.((((.(((((((.(....((((((((.............................)))))))).....).))))))).)))).))).))))))).))))))))))

Structure
          a       G   C    C       U -uccu        uccucucggcucu 
uuaucuucau cuuUUGU UUG GUUU UGUUGAU c     uuuaugua             c
|||||||||| ||||||| ||| |||| ||||||| |     ||||||||             u
aguagaagua gaagaca aac caaa acaacua g     aaauacau             c
          c       a   a    u       c ugcuc        uauuuucuaauug 


Annotation confidence Not enough data
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Genome context
chr3: 22678152-22678279 [+]

Database links

Mature ath-miR8182

Accession MIMAT0032781
Description Arabidopsis thaliana ath-miR8182 mature miRNA
Sequence 15 - UUGUGUUGCGUUUCUGUUGAUU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701