miRBase entry: ath-MIR8169

Stem-loop ath-MIR8169


Accession
MI0026799
Description
Arabidopsis thaliana ath-MIR8169 precursor miRNA


Sequence

auaucuucuggagaacgaaaaucuggaggugagaucauugcugauuugaauuguaaauuuuuuaugaaaauuuugugguaaucaaaucuaauggcgaaaauucAUAGACAGAGUCACUCACAGAgauau
((((((.((((((...((...((((...(((((....((((((((((((((((.((((((((...))))))))..))))..)))))))....)))))...)))))...)))).)).))).)))))))))

Structure
      u   -   aac  aaa    gag     auca     ----       --    -u        u 
auaucu cug gag   ga   ucug   gugag    uugcu    gauuuga  auug  aaauuuuu  
|||||| ||| |||   ||   ||||   |||||    |||||    |||||||  ||||  |||||||| a
uauagA GAC CUC   CU   AGAC   UAcuu    agcgg    cuaaacu  uggu  uuuaaaag  
      -   A   --A  --G    AGA     -aaa     uaau       aa    gu        u 


Annotation confidence Not enough data
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Genome context
chr3: 8836256-8836384 [+]

Database links

Mature ath-miR8169

Accession MIMAT0032767
Description Arabidopsis thaliana ath-miR8169 mature miRNA
Sequence 104 - AUAGACAGAGUCACUCACAGA - 124
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701