miRBase entry: ath-MIR8166

Stem-loop ath-MIR8166


Accession
MI0026794
Description
Arabidopsis thaliana ath-MIR8166 precursor miRNA


Sequence

aauaaaaauaaugaaaaugaaggAGAGAGUGUAGAAAGUUUCUCAcuugagauacuuuuuacaacccaucaugacaauuuucauuuuauu
.........(((((((((....((..(..((((((((((.((((....)))).))))))))))..)..))......))))))))).....

Structure
aauaaaaau         --gaag  GA AG          U    A 
         aaugaaaau      gA  G  UGUAGAAAGU UCUC c
         |||||||||      ||  |  |||||||||| ||||  
         uuacuuuua      cu  c  acauuuuuca agag u
----uuauu         acagua  ac ca          u    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 4525271-4525360 [-]

Database links

Mature ath-miR8166

Accession MIMAT0032762
Description Arabidopsis thaliana ath-miR8166 mature miRNA
Sequence 24 - AGAGAGUGUAGAAAGUUUCUCA - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701