miRBase entry: ssa-mir-9a-7

Stem-loop ssa-mir-9a-7


Accession
MI0026775
Description
Salmo salar ssa-mir-9a-7 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

UCUUUGGUUAUCUAGCUGUAUGAguguuacucggccgucaUAAAGCUAGCUAACCGAAAGUA
..((((((((.((((((.(((((..(((....)))..))))).)))))).))))))))....

Structure
--UC        U      G     gu   a 
    UUUGGUUA CUAGCU UAUGA  guu c
    |||||||| |||||| |||||  |||  
    AAGCCAAU GAUCGA AUacu  cgg u
AUGA        C      A     gc   c 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-9a-5p

Accession MIMAT0032721
Description Salmo salar ssa-miR-9a-5p mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-9a-7-3p

Accession MIMAT0032728
Description Salmo salar ssa-miR-9a-7-3p mature miRNA
Sequence 41 - UAAAGCUAGCUAACCGAAAGUA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482