miRBase entry: ssa-mir-9a-3

Stem-loop ssa-mir-9a-3


Accession
MI0026771
Description
Salmo salar ssa-mir-9a-3 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

UCUUUGGUUAUCUAGCUGUAUGAguuauaauuucaUAAAGCUAGAGAACCGAAAGUA
..(((((((.(((((((.((((((.......)))))).))))))).)))))))....

Structure
--UC       A       G      uu 
    UUUGGUU UCUAGCU UAUGAg  a
    ||||||| ||||||| ||||||  u
    AAGCCAA AGAUCGA AUacuu  a
AUGA       G       A      ua 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-9a-5p

Accession MIMAT0032721
Description Salmo salar ssa-miR-9a-5p mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-9a-3-3p

Accession MIMAT0032724
Description Salmo salar ssa-miR-9a-3-3p mature miRNA
Sequence 36 - UAAAGCUAGAGAACCGAAAGUA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482