Stem-loop ssa-mir-9a-1

Accession

MI0026769

Description

Salmo salar ssa-mir-9a-1 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

UCUUUGGUUAUCUAGCUGUAUGAguuuaugugauaucaUAAAGCUAGAGAACCGAAUGUAU
..(((((((.(((((((.(((((..((....))..))))).))))))).))))))).....

Structure

---UC       A       G     gu  a 
     UUUGGUU UCUAGCU UAUGA  uu u
     ||||||| ||||||| |||||  ||  
     AAGCCAA AGAUCGA AUacu  ag g
UAUGU       G       A     au  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-9a-5p

• Accession: MIMAT0032721
• Description: Salmo salar ssa-miR-9a-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-9a-1-3p

• Accession: MIMAT0032722
• Description: Salmo salar ssa-miR-9a-1-3p mature miRNA
• Sequence: 39 - UAAAGCUAGAGAACCGAAUGUAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482