miRBase entry: ssa-mir-7a-7

Stem-loop ssa-mir-7a-7


Accession
MI0026751
Description
Salmo salar ssa-mir-7a-7 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

UGGAAGACUAGUGAUUUUGUUGUuguaaauuuagcucacugaCAACAAGUCACAGUCUACCUC
.((.(((((.(((((((.((((((((...........)).)))))))))))))))))).))..

Structure
-U  A     A       U      -  aaau 
  GG AGACU GUGAUUU GUUGUu gu    u
  || ||||| ||||||| |||||| ||    u
  CC UCUGA CACUGAA CAACag ca    a
CU  A     -       -      u  cucg 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-7a-5p

Accession MIMAT0032693
Description Salmo salar ssa-miR-7a-5p mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-7a-7-3p

Accession MIMAT0032700
Description Salmo salar ssa-miR-7a-7-3p mature miRNA
Sequence 43 - CAACAAGUCACAGUCUACCUC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482