Stem-loop ssa-mir-7a-5

Accession

MI0026749

Description

Salmo salar ssa-mir-7a-5 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

UGGAAGACUAGUGAUUUUGUUGUuguaaauucagcacccagaCAACAAGUCAUAGUCUACCUCA
.((.((((((.((((((.((((((................)))))))))))))))))).))...

Structure

--U  A      G      U      guaaauu 
   GG AGACUA UGAUUU GUUGUu       c
   || |||||| |||||| ||||||        
   CC UCUGAU ACUGAA CAACag       a
ACU  A      -      -      acccacg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7a-5p

• Accession: MIMAT0032693
• Description: Salmo salar ssa-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7a-5-3p

• Accession: MIMAT0032698
• Description: Salmo salar ssa-miR-7a-5-3p mature miRNA
• Sequence: 43 - CAACAAGUCAUAGUCUACCUCA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482