Stem-loop ssa-mir-7a-4

Accession

MI0026748

Description

Salmo salar ssa-mir-7a-4 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

UGGAAGACUAGUGAUUUUGUUGUuguaaauuuagcucucugaCAACAAGUCACAGUCUACCUC
.((.(((((.(((((((.((((((................)))))))))))))))))).))..

Structure

-U  A     A       U      guaaauu 
  GG AGACU GUGAUUU GUUGUu       u
  || ||||| ||||||| ||||||        
  CC UCUGA CACUGAA CAACag       a
CU  A     -       -      ucucucg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7a-5p

• Accession: MIMAT0032693
• Description: Salmo salar ssa-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7a-4-3p

• Accession: MIMAT0032697
• Description: Salmo salar ssa-miR-7a-4-3p mature miRNA
• Sequence: 43 - CAACAAGUCACAGUCUACCUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482