miRBase entry: ssa-mir-7a-2

Stem-loop ssa-mir-7a-2


Accession
MI0026746
Description
Salmo salar ssa-mir-7a-2 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

UGGAAGACUAGUGAUUUUGUUGUgaugcugagcaaugagaaCAACAAGUCCCAGUCUGCCUCU
.((.(((((.(.(((((.(((((..(((...)))......))))))))))).))))).))...

Structure
--U  A     A U     U     ----ga   u 
   GG AGACU G GAUUU GUUGU      ugc  
   || ||||| | ||||| |||||      ||| g
   CC UCUGA C CUGAA CAACa      acg  
UCU  G     C -     -     agagua   a 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-7a-5p

Accession MIMAT0032693
Description Salmo salar ssa-miR-7a-5p mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-7a-2-3p

Accession MIMAT0032695
Description Salmo salar ssa-miR-7a-2-3p mature miRNA
Sequence 42 - CAACAAGUCCCAGUCUGCCUCU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482