Stem-loop ssa-mir-731

Accession

MI0026737

Description

Salmo salar ssa-mir-731 precursor miRNA

Literature search

2 open access papers mention ssa-mir-731
(30 sentences)

Sequence

AAUGACACGUUUUCUCCCGGAUUgccaaacacacuauaaggCACCGGGAAUUUCGUGUCAGCA
..(((((((.....((((((..((((.............))))))))))....)))))))...

Structure

-AA       UUUUC      AU    aaaca 
   UGACACG     UCCCGG  Ugcc     c
   |||||||     ||||||  ||||     a
   ACUGUGC     AGGGCC  ACgg     c
ACG       -UUUA      --    aauau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-731-5p

• Accession: MIMAT0032682
• Description: Salmo salar ssa-miR-731-5p mature miRNA
• Sequence: 1 - AAUGACACGUUUUCUCCCGGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-731-3p

• Accession: MIMAT0032683
• Description: Salmo salar ssa-miR-731-3p mature miRNA
• Sequence: 42 - CACCGGGAAUUUCGUGUCAGCA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482