miRBase entry: ssa-mir-724-4

Stem-loop ssa-mir-724-4


Accession
MI0026729
Description
Salmo salar ssa-mir-724-4 precursor miRNA
Gene family
MIPF0001616; mir-724

Literature search
1 open access papers mention ssa-mir-724-4
(5 sentences)

Sequence

UUAAAGGGAAUUUGCGACUGUUagucaaaccguuagaaCAGCCACACCUUCCUUUUAAGA
((((((((((..((.(.(((((...(.....)....))))).).))..))))))))))..

Structure
--          UU  C A     -agu a 
  UUAAAGGGAA  UG G CUGUU    c a
  ||||||||||  || | |||||    | a
  AAUUUUCCUU  AC C GACaa    g c
AG          CC  A C     gauu c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-724-5p

Accession MIMAT0032671
Description Salmo salar ssa-miR-724-5p mature miRNA
Sequence 1 - UUAAAGGGAAUUUGCGACUGUU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-724-3p

Accession MIMAT0032672
Description Salmo salar ssa-miR-724-3p mature miRNA
Sequence 39 - CAGCCACACCUUCCUUUUAAGA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482