miRBase entry: ssa-mir-499b-1

Stem-loop ssa-mir-499b-1


Accession
MI0026717
Description
Salmo salar ssa-mir-499b-1 precursor miRNA
Gene family
MIPF0000173; mir-499


Sequence

UUAAGACUUGCAGUGAUGUUUAgguaacucagcucaugAACAUCACUUUAAGUCUGUGCU
...(((((((.((((((((((((((......)))..))))))))))).))))))).....

Structure
--UUA       C           --   aa 
     AGACUUG AGUGAUGUUUA  ggu  c
     ||||||| |||||||||||  |||   
     UCUGAAU UCACUACAAgu  ucg  u
UCGUG       U           ac   ac 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-499b-5p

Accession MIMAT0032661
Description Salmo salar ssa-miR-499b-5p mature miRNA
Sequence 1 - UUAAGACUUGCAGUGAUGUUUA - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-499b-3p

Accession MIMAT0032662
Description Salmo salar ssa-miR-499b-3p mature miRNA
Sequence 39 - AACAUCACUUUAAGUCUGUGCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482