Stem-loop ssa-mir-499a

Accession

MI0026716

Description

Salmo salar ssa-mir-499a precursor miRNA

Gene family

MIPF0000173; mir-499

Sequence

UUAAGACUUGUAGUGAUGUUUagggaaauuaucacaugAACAUCACUUUAAGUCUCUGCU
...(((((((.(((((((((((.(((.....)).).))))))))))).))))))).....

Structure

--UUA       U           g -  a 
     AGACUUG AGUGAUGUUUa g ga a
     ||||||| ||||||||||| | || u
     UCUGAAU UCACUACAAgu c cu u
UCGUC       U           a a  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-499a-5p

• Accession: MIMAT0032659
• Description: Salmo salar ssa-miR-499a-5p mature miRNA
• Sequence: 1 - UUAAGACUUGUAGUGAUGUUU - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-499a-3p

• Accession: MIMAT0032660
• Description: Salmo salar ssa-miR-499a-3p mature miRNA
• Sequence: 39 - AACAUCACUUUAAGUCUCUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482