Stem-loop ssa-mir-489-1

Accession

MI0026714

Description

Salmo salar ssa-mir-489-1 precursor miRNA

Gene family

MIPF0000111; mir-489

Sequence

UGGUCGUAUGUAUGACGUCAUUuacuucaauguuuggagUGACAUCAUAUGUACGGCUGCU
.((((((((((((((.(((((((((......))...))))))).))))))))))))))...

Structure

--U              C       ---  uu 
   GGUCGUAUGUAUGA GUCAUUu   ac  c
   |||||||||||||| |||||||   ||   
   UCGGCAUGUAUACU CAGUgag   ug  a
UCG              A       guu  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-489-5p

• Accession: MIMAT0032657
• Description: Salmo salar ssa-miR-489-5p mature miRNA
• Sequence: 1 - UGGUCGUAUGUAUGACGUCAUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-489-3p

• Accession: MIMAT0032658
• Description: Salmo salar ssa-miR-489-3p mature miRNA
• Sequence: 40 - UGACAUCAUAUGUACGGCUGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482