Stem-loop ssa-mir-301b

Accession

MI0026671

Description

Salmo salar ssa-mir-301b precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

GCUUUGACGAUGUUGCACUACUguuccaucggcugaagCAGUGCAACAGUAUUGUCAUGGC
(((.(((((((((((((((.((...((...))....)).)))))))))...)))))).)))

Structure

   U      ---         A  -guu  a 
GCU UGACGA   UGUUGCACU CU    cc  
||| ||||||   ||||||||| ||    || u
CGG ACUGUU   ACAACGUGA ga    gg  
   U      AUG         C  aguc  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-301b-5p

• Accession: MIMAT0032594
• Description: Salmo salar ssa-miR-301b-5p mature miRNA
• Sequence: 1 - GCUUUGACGAUGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-301b-3p

• Accession: MIMAT0032595
• Description: Salmo salar ssa-miR-301b-3p mature miRNA
• Sequence: 39 - CAGUGCAACAGUAUUGUCAUGGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482