Stem-loop ssa-mir-26b

Accession

MI0026655

Description

Salmo salar ssa-mir-26b precursor miRNA

Gene family

MIPF0000043; mir-26

Literature search

3 open access papers mention ssa-mir-26b
(9 sentences)

Sequence

UUCAAGUAAUCCAGGAUAGGUUuguucagaaagguaaagCCUAUUCUGCAUGACUUGGUUC
.((((((.((.((((((((((((..((.....))..)))))))))))).)).))))))...

Structure

--U      A  C            gu  a 
   UCAAGU AU CAGGAUAGGUUu  uc g
   |||||| || ||||||||||||  || a
   GGUUCA UA GUCUUAUCCgaa  gg a
CUU      G  C            au  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-26b-5p

• Accession: MIMAT0032569
• Description: Salmo salar ssa-miR-26b-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-26b-3p

• Accession: MIMAT0032570
• Description: Salmo salar ssa-miR-26b-3p mature miRNA
• Sequence: 40 - CCUAUUCUGCAUGACUUGGUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482