miRBase entry: ssa-mir-26a-6

Stem-loop ssa-mir-26a-6


Accession
MI0026654
Description
Salmo salar ssa-mir-26a-6 precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
2 open access papers mention ssa-mir-26a-6
(6 sentences)

Sequence

UUCAAGUAAUCCAGGAUAGGCUguguguauccugguuggCCUAUUCAUGAUUACUUGUACU
..(((((((((..((((((((((.............))))))))))..)))))))))....

Structure
--UU         CA          ugugu 
    CAAGUAAUC  GGAUAGGCUg     a
    |||||||||  ||||||||||     u
    GUUCAUUAG  CUUAUCCggu     c
UCAU         UA          ugguc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-26a-5p

Accession MIMAT0032563
Description Salmo salar ssa-miR-26a-5p mature miRNA
Sequence 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-26a-6-3p

Accession MIMAT0032568
Description Salmo salar ssa-miR-26a-6-3p mature miRNA
Sequence 40 - CCUAUUCAUGAUUACUUGUACU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482