Stem-loop ssa-mir-22b-1

Accession

MI0026634

Description

Salmo salar ssa-mir-22b-1 precursor miRNA

Gene family

MIPF0000053; mir-22

Sequence

CGUUCUUCACUGGCUAGCUUUaugucucacuccccucuguaAAGCUGCCAGUUGAAGAGCUGU
.(((((((((((((.((((((((...............))))))))))))).))))))))...

Structure

--C        -     U        gucuca 
   GUUCUUCA CUGGC AGCUUUau      c
   |||||||| ||||| ||||||||      u
   CGAGAAGU GACCG UCGAAaug      c
UGU        U     -        ucuccc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-22b-5p

• Accession: MIMAT0032546
• Description: Salmo salar ssa-miR-22b-5p mature miRNA
• Sequence: 1 - CGUUCUUCACUGGCUAGCUUU - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-22b-3p

• Accession: MIMAT0032547
• Description: Salmo salar ssa-miR-22b-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGUUGAAGAGCUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482