miRBase entry: ssa-mir-205a-2

Stem-loop ssa-mir-205a-2


Accession
MI0026595
Description
Salmo salar ssa-mir-205a-2 precursor miRNA
Gene family
MIPF0000058; mir-205

Literature search
0 open access papers mention ssa-mir-205a-2
(0 sentences)

Sequence

UCCUUCAUUCCACCGGAUCCUguuucccagucugcagAUUCCCAGUGGGAUGAAGCGC
..(((((((((((.(((..((((..........))))..)))..)))))))))))...

Structure
-UC           -C   UC    uucc 
   CUUCAUUCCAC  GGA  CUgu    c
   |||||||||||  |||  ||||     
   GAAGUAGGGUG  CCU  gacg    a
CGC           AC   UA    ucug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-205a-5p

Accession MIMAT0032492
Description Salmo salar ssa-miR-205a-5p mature miRNA
Sequence 1 - UCCUUCAUUCCACCGGAUCCU - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-205a-2-3p

Accession MIMAT0032494
Description Salmo salar ssa-miR-205a-2-3p mature miRNA
Sequence 38 - AUUCCCAGUGGGAUGAAGCGC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482