miRBase entry: ssa-mir-19a-2

Stem-loop ssa-mir-19a-2


Accession
MI0026571
Description
Salmo salar ssa-mir-19a-2 precursor miRNA
Gene family
MIPF0000011; mir-19


Sequence

AGUUUUGCAUAGUUGCACUAcaagaaaaauugaguUGUGCAAAUCUAUGCAAAACUGu
((((((((((((((((((.((..((....))..)).))))))..))))))))))))..

Structure
--            --      U  aa  a 
  AGUUUUGCAUAG  UUGCAC Ac  ga a
  ||||||||||||  |||||| ||  ||  
  UCAAAACGUAUC  AACGUG ug  uu a
uG            UA      U  ag  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-19a-5p

Accession MIMAT0032462
Description Salmo salar ssa-miR-19a-5p mature miRNA
Sequence 1 - AGUUUUGCAUAGUUGCACUA - 20
Evidence experimental
Illumina [1]

Mature ssa-miR-19a-3p

Accession MIMAT0032463
Description Salmo salar ssa-miR-19a-3p mature miRNA
Sequence 36 - UGUGCAAAUCUAUGCAAAACUG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482