Stem-loop ssa-mir-194b

Accession

MI0026557

Description

Salmo salar ssa-mir-194b precursor miRNA

Gene family

MIPF0000055; mir-194

Sequence

UGUAACAGCAUCUCCAUAUGGAauagcucaggguuCCAGUGGAGCUGCUGUUAUGGG
.(((((((((.((((((.((((((........)))))))))))).)))))))))...

Structure

--U         U      A      agc 
   GUAACAGCA CUCCAU UGGAau   u
   ||||||||| |||||| ||||||    
   UAUUGUCGU GAGGUG ACCuug   c
GGG         C      -      gga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-194b-5p

• Accession: MIMAT0032449
• Description: Salmo salar ssa-miR-194b-5p mature miRNA
• Sequence: 1 - UGUAACAGCAUCUCCAUAUGGA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-194b-3p

• Accession: MIMAT0032450
• Description: Salmo salar ssa-miR-194b-3p mature miRNA
• Sequence: 36 - CCAGUGGAGCUGCUGUUAUGGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482