Stem-loop ssa-mir-182

Accession

MI0026543

Description

Salmo salar ssa-mir-182 precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

UUUGGCAAUGGUAGAACUCACAcuggugagguagcuggauccggUGGUUCUAGACUUGCCAACU
.(((((((...((((((...((((((..((....))....))))))))))))...)))))))..

Structure

-U       UGG      UCA      --ug  g 
  UUGGCAA   UAGAAC   CAcugg    ag u
  |||||||   ||||||   ||||||    ||  
  AACCGUU   AUCUUG   GUggcc    uc a
UC       CAG      ---      uagg  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-182-5p

• Accession: MIMAT0032427
• Description: Salmo salar ssa-miR-182-5p mature miRNA
• Sequence: 1 - UUUGGCAAUGGUAGAACUCACA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-182-3p

• Accession: MIMAT0032428
• Description: Salmo salar ssa-miR-182-3p mature miRNA
• Sequence: 45 - UGGUUCUAGACUUGCCAACU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482