Stem-loop ssa-mir-181a-4

Accession

MI0026539

Description

Salmo salar ssa-mir-181a-4 precursor miRNA

Gene family

MIPF0000007; mir-181

Literature search

4 open access papers mention ssa-mir-181a-4
(15 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGUuugagcuaaauugacaaaaACCAUCGACCGUUGAGUGUACC
.((((((((((..(((((((.((((..((......).)..)))))))))))))))))))))...

Structure

--A          CU       A    ga - ua 
   ACAUUCAACG  GUCGGUG GUuu  g c  a
   ||||||||||  ||||||| ||||  | |   
   UGUGAGUUGC  CAGCUAC CAaa  c g  a
CCA          --       -    aa a uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-181a-5p

• Accession: MIMAT0032417
• Description: Salmo salar ssa-miR-181a-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-181a-4-3p

• Accession: MIMAT0032421
• Description: Salmo salar ssa-miR-181a-4-3p mature miRNA
• Sequence: 43 - ACCAUCGACCGUUGAGUGUACC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482