miRBase entry: ssa-mir-15b

Stem-loop ssa-mir-15b


Accession
MI0026523
Description
Salmo salar ssa-mir-15b precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
0 open access papers mention ssa-mir-15b
(0 sentences)

Sequence

UAGCAGCACAUCAUGUUUUGCagguaucuaaaagcaacucCAAAUCAUUAUGUGCUGCCGCU
..(((((((((.(((.((((.((..............)).)))).))).)))))))))....

Structure
--UA         C   U    C  guaucu 
    GCAGCACAU AUG UUUG ag      a
    ||||||||| ||| |||| ||       
    CGUCGUGUA UAC AAAC uc      a
UCGC         U   U    c  aacgaa 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-15b-5p

Accession MIMAT0032396
Description Salmo salar ssa-miR-15b-5p mature miRNA
Sequence 1 - UAGCAGCACAUCAUGUUUUGC - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-15b-3p

Accession MIMAT0032397
Description Salmo salar ssa-miR-15b-3p mature miRNA
Sequence 41 - CAAAUCAUUAUGUGCUGCCGCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482