miRBase entry: ssa-mir-137-1

Stem-loop ssa-mir-137-1


Accession
MI0026491
Description
Salmo salar ssa-mir-137-1 precursor miRNA
Gene family
MIPF0000106; mir-137

Literature search
1 open access papers mention ssa-mir-137-1
(6 sentences)

Sequence

ACGGGUAUUCUUGGGUUGAUAAuacagaugucgaugUUAUUGCUUGAGAAUACGCGUAG
(((.((((((((((((.(((((((..(....)..))))))))))))))))))).)))..

Structure
--   G            U       ca a 
  ACG GUAUUCUUGGGU GAUAAua  g u
  ||| |||||||||||| |||||||  |  
  UGC CAUAAGAGUUCG UUAUUgu  c g
GA   G            -       ag u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-137-5p

Accession MIMAT0032350
Description Salmo salar ssa-miR-137-5p mature miRNA
Sequence 1 - ACGGGUAUUCUUGGGUUGAUAA - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-137-3p

Accession MIMAT0032351
Description Salmo salar ssa-miR-137-3p mature miRNA
Sequence 37 - UUAUUGCUUGAGAAUACGCGUAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482