Stem-loop ssa-mir-130d-3

Accession

MI0026474

Description

Salmo salar ssa-mir-130d-3 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

GCCCCUUUUCUAUUGCACUACUggguaaagagaugagCAGUGCAAUAUUAAAAGGGCA
((((.(((..(((((((((.((.(.........).)).)))))))))..))).)))).

Structure

-    C   UC         A  g gua 
 GCCC UUU  UAUUGCACU CU g   a
 |||| |||  ||||||||| || |   a
 CGGG AAA  AUAACGUGA ga u   g
A    A   UU         C  g aga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-130d-3p

• Accession: MIMAT0032328
• Description: Salmo salar ssa-miR-130d-3p mature miRNA
• Sequence: 38 - CAGUGCAAUAUUAAAAGGGCA - 58
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-130d-3-5p

• Accession: MIMAT0032330
• Description: Salmo salar ssa-miR-130d-3-5p mature miRNA
• Sequence: 1 - GCCCCUUUUCUAUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482