miRBase entry: ssa-mir-129-3

Stem-loop ssa-mir-129-3


Accession
MI0026467
Description
Salmo salar ssa-mir-129-3 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

CUUUUUGCGGUCUGGGCUUGCuguucauaaggcaguagccaggAAGCCCUUACCCCAAAAAGUAU
(((((((.(((..((((((.((........(((....))))).))))))..))).)))))))...

Structure
---       C   CU      G  guucauaa   a 
   CUUUUUG GGU  GGGCUU Cu        ggc g
   ||||||| |||  |||||| ||        |||  
   GAAAAAC CCA  CCCGAA ga        ccg u
UAU       C   UU      g  --------   a 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-129-5p

Accession MIMAT0032318
Description Salmo salar ssa-miR-129-5p mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-129-3-3p

Accession MIMAT0032320
Description Salmo salar ssa-miR-129-3-3p mature miRNA
Sequence 44 - AAGCCCUUACCCCAAAAAGUAU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482