Stem-loop ssa-mir-129-2

Accession

MI0026466

Description

Salmo salar ssa-mir-129-2 precursor miRNA

Gene family

MIPF0000073; mir-129

Sequence

CUUUUUGCGGUCUGGGCUUGCuguuaacacaccucaacccaggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.(((................))).))))))..))).)))))))...

Structure

---       C   CU      G   uuaacac 
   CUUUUUG GGU  GGGCUU Cug       a
   ||||||| |||  |||||| |||        
   GAAAAAC CCA  CCCGAA gac       c
UAC       C   UU      g   ccaacuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-129-5p

• Accession: MIMAT0032318
• Description: Salmo salar ssa-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-129-3p

• Accession: MIMAT0032319
• Description: Salmo salar ssa-miR-129-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGCAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482