miRBase entry: ssa-mir-128-2

Stem-loop ssa-mir-128-2


Accession
MI0026462
Description
Salmo salar ssa-mir-128-2 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

CGGGGCCGGGGCACUGUCUGAGAggccuaugauucUCACAGUGAACCGGUCUCUUU
.((((((((..((((((..(((((........)))))))))))..))))))))...

Structure
--C        GG      CU     gcc 
   GGGGCCGG  CACUGU  GAGAg   u
   ||||||||  ||||||  |||||    
   CUCUGGCC  GUGACA  CUcuu   a
UUU        AA      --     agu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-128-3p

Accession MIMAT0032314
Description Salmo salar ssa-miR-128-3p mature miRNA
Sequence 36 - UCACAGUGAACCGGUCUCUUU - 56
Evidence experimental
Illumina [1]

Mature ssa-miR-128-2-5p

Accession MIMAT0032315
Description Salmo salar ssa-miR-128-2-5p mature miRNA
Sequence 1 - CGGGGCCGGGGCACUGUCUGAGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482