Stem-loop ssa-mir-125b-2

Accession

MI0026455

Description

Salmo salar ssa-mir-125b-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

3 open access papers mention ssa-mir-125b-2
(9 sentences)

Sequence

UCCCUGAGACCCUUAACCUGUGAuuacuucaagaucaCAGGUGAGGUCCUUGGGAAC
((((.(((..(((((.(((((((((.......))))))))))))))..)))))))..

Structure

--    U   AC     A         ac 
  UCCC GAG  CCUUA CCUGUGAuu  u
  |||| |||  ||||| |||||||||  u
  AGGG UUC  GGAGU GGACacuag  c
CA    -   CU     -         aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-125b-5p

• Accession: MIMAT0032307
• Description: Salmo salar ssa-miR-125b-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUUAACCUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-125b-2-3p

• Accession: MIMAT0032309
• Description: Salmo salar ssa-miR-125b-2-3p mature miRNA
• Sequence: 38 - CAGGUGAGGUCCUUGGGAAC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482