Stem-loop ssa-mir-10b-2

Accession

MI0026445

Description

Salmo salar ssa-mir-10b-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

2 open access papers mention ssa-mir-10b-2
(9 sentences)

Sequence

UACCCUGUAGAACCGAAUUUGUgugauaaaacaagucACAGAUUCGAUUCUAGGGGAGU
...(((.(((((.((((((((((.............)))))))))).))))).)))...

Structure

UAC   G     C          ugaua 
   CCU UAGAA CGAAUUUGUg     a
   ||| ||||| ||||||||||     a
   GGG AUCUU GCUUAGACAc     a
UGA   G     A          ugaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-10b-5p

• Accession: MIMAT0032295
• Description: Salmo salar ssa-miR-10b-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-10b-2-3p

• Accession: MIMAT0032297
• Description: Salmo salar ssa-miR-10b-2-3p mature miRNA
• Sequence: 38 - ACAGAUUCGAUUCUAGGGGAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482