Stem-loop lus-MIR398f

Accession

MI0026413

Description

Linum usitatissimum lus-MIR398f precursor miRNA

Gene family

MIPF0000107; MIR398

Literature search

3 open access papers mention lus-MIR398f
(13 sentences)

Sequence

ccgggucgacuagagaacacacgaagagaaguccgcaacgaguggggcgcuucguuucacuuuccugGGUGUUCUCAGGUCGCCCCUG
..(((.(((((.((((((((..((((.(((((((.((.....)).)).))))).)))).((.....)))))))))).))))).)))..

Structure

cc   u     a        acgaagagaaguccgcaacgaguggggcgcuucguuuca  u 
  ggg cgacu gagaacac                                       cu u
  ||| ||||| ||||||||                                       || c
  CCC GCUGG CUCUUGUG                                       Gg c
GU   C     A        ---------------------------------------  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR398f

• Accession: MIMAT0031861
• Description: Linum usitatissimum lus-miR398f mature miRNA
• Sequence: 68 - GGUGUUCUCAGGUCGCCCCUG - 88
• Evidence: not_experimental

References

1. PubMed ID: 22841625
   Identification and characterization of miRNAs and their potential targets in flax
   "Neutelings G, Fenart S, Lucau-Danila A, Hawkins S"
   "J Plant Physiol (2012) 169:1754-1766