Stem-loop cpa-MIR171d

Accession

MI0026361

Description

Carica papaya cpa-MIR171d precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

1 open access papers mention cpa-MIR171d
(1 sentences)

Sequence

uauugguccgguucaauaagaaaacagugcucugaucguguugaguucugcuuuuUGAUUGAGCCGUGCCAAUAUC
(((((((.(((((((((.(((((.(((.((((..........)))).))).))))).))))))))).)))))))..

Structure

--       c         a     a   u    ugau 
  uauuggu cgguucaau agaaa cag gcuc    c
  ||||||| ||||||||| ||||| ||| ||||     
  AUAACCG GCCGAGUUA Uuuuu guc ugag    g
CU       U         G     c   u    uugu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR171d

• Accession: MIMAT0031809
• Description: Carica papaya cpa-miR171d mature miRNA
• Sequence: 56 - UGAUUGAGCCGUGCCAAUAUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682